RNA 3D Hub //

6AH3 Hairpin, Internal, and multi-helix Junction Loop Motifs

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Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_6AH3_0041/A/155:160No text annotation
HL_6AH3_0091/T/13:22tRNA D-loop
homologous
HL_7UQ6_001
HL_20490.1
HL_6AH3_0111/T/53:61T-loop with 2 stacked bulged bases
homologous
HL_1U0B_003
HL_33597.6

Problematic loops

#loop idProblemSequence
HL_6AH3_001No text annotation
HL_6AH3_002No text annotation
HL_6AH3_003No text annotation
HL_6AH3_012No text annotation
HL_6AH3_005No text annotation
HL_6AH3_006No text annotation
HL_6AH3_007No text annotation
HL_6AH3_008No text annotation
HL_6AH3_010No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_6AH3_0121/A/36:47,
1/A/71:81		No text annotation
IL_6AH3_0041/A/164:173,
1/A/186:188		No text annotation
IL_6AH3_0071/A/274:276,
1/A/295:297		No text annotation

Problematic loops

#loop idProblemSequence
IL_6AH3_010No text annotation
IL_6AH3_001No text annotation
IL_6AH3_002No text annotation
IL_6AH3_003No text annotation
IL_6AH3_005No text annotation
IL_6AH3_011No text annotation
IL_6AH3_013No text annotation
IL_6AH3_006No text annotation
IL_6AH3_008No text annotation
IL_6AH3_009No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_6AH3_0021/A/14:32,
1/A/85:94,
1/A/349:355		No text annotation
J4_6AH3_0011/A/98:108,
1/A/264:269,
1/A/303:324,
1/A/337:345		No text annotation
J4_6AH3_0031/T/7:10,
1/T/25:27,
1/T/43:49,
1/T/65:66		tRNA junction
homologous
J4_5AXM_001
J4_95067.2
J6_6AH3_0021/A/112:113,
1/A/116:123,
1/A/150:154,
1/A/161:173,
1/A/186:197,
1/A/256:260		No text annotation

Problematic loops

#loop idProblemSequence
J3_6AH3_001No text annotation
J4_6AH3_002No text annotation
J6_6AH3_001No text annotation

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